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Selected Publications Utilizing Equipment from PyroScience

2016

B

Metabolic performance of the coral reef fish Siganus guttatus exposed to combinations of water borne diesel, an anionic surfactant and elevated temperature in Indonesia
Baum et al., 2016, Marine Pollution Bulletin
https://doi.org/10.1016/j.marpolbul.2016.02.078

Let the substrate flow, not the enzyme: Practical immobilization of d-amino acid oxidase in a glass microreactor for effective biocatalytic conversions
Bolivar et al., 2016, Biotechnology and Bioengineering
https://doi.org/10.1002/bit.26011

C

Regulation of Intertidal Microphytobenthos Photosynthesis Over a Diel Emersion Period Is Strongly Affected by Diatom Migration Patterns
Cartaxana et al., 2016, Frontiers in Microbiology
http://doi.org/10.3389/fmicb.2016.00872

Flow and Coral Morphology Control Coral Surface pH: Implications for the Effects of Ocean Acidification
Chan et al., 2016, Frontiers in Marine Science
https://doi.org/10.3389/fmars.2016.00010

The Architecture of Iron Microbial Mats Reflects the Adaptation of Chemolithotrophic Iron Oxidation in Freshwater and Marine Environments
Chan et al. 2016, Frontiers in Microbiology
https://doi.org/10.3389/fmicb.2016.00796

Taking advantage of adaptations when managing threatened species within variable environments: the case of the dwarf galaxias, Galaxiella pusilla (Teleostei, Galaxiidae)
Coleman et al., 2016, Marine and Freshwater Research
http://dx.doi.org/10.1071/MF15332

Physiological plasticity v. inter-population variability: understanding drivers of hypoxia tolerance in a tropical estuarine fish
Collins et al., 2016, Marine and Freshwater Research
http://dx.doi.org/10.1071/MF15046

Gill structural change in response to turbidity has no effect on the oxygen uptake of a juvenile sparid fish
Cumming and Herbert, 2016, Conservation Physiology
https://doi.org/10.1093/conphys/cow033

D

Production of Reactive Oxygen Species in the Rhizosphere of a Spartina-Dominated Salt Marsh Systems
Dias et al. 2016, Aquatic Geochemistry
https://doi.org/10.1007/s10498-016-9307-1

Simulation of the role of vibration on Scanning Vibrating Electrode Technique measurements close to a disc in plane
Dolgikh et al. 2016, Electrochimica Acta
https://doi.org/10.1016/j.electacta.2016.01.188

E

Oxygen dependence of upper thermal limits in fishes
Ern et al., 2016, Journal of Experimental Biology
http://doi.org/10.1242/jeb.143495

F

Effects of Hypoxia on the Physiology of Zebrafish (Danio rerio): Initial Responses, Acclimation and Recovery
Feng et al., 2016, Bulletin of Environmental Contamination and Toxicology
http://doi.org/10.1007/s00128-015-1668-4

Respiration activity monitoring system for any individual well of a 48-well microtiter plate
Flitsch et al., 2016, Journal of Biological Engineering
http://doi.org/10.1186/s13036-016-0034-3

Easy to use and reliable technique for online dissolved oxygen tension measurement in shake flasks using infrared fluorescent oxygen-sensitive nanoparticles
Flitsch et al., 2016, Microbial Cell Factories
http://doi.org/10.1186/s12934-016-0444-4

G

Drag Reduction by Bubble-Covered Surfaces Found in PDMS Microchannel through Depressurization
Gao et al., 2016, Langmuir
http://doi.org/10.1021/acs.langmuir.6b01186

H

Seeing is believing: metabolism provides insight into threat perception for a prey species of coral reef fish
Hall and Clark, 2016, Animal Behaviour
https://doi.org/10.1016/j.anbehav.2016.03.008

Photoregulation in a Kleptochloroplastidic Dinoflagellate, Dinophysis acuta
Hansen et al. 2016, Frontiers in Microbiology
https://doi.org/10.3389/fmicb.2016.00785

Biotic Control of Surface pH and Evidence of Light-Induced H+ Pumping and Ca2+-H+ Exchange in a Tropical Crustose Coralline Alga
Hofmann et al., 2016, PLOS One
http://dx.doi.org/10.1371/journal.pone.0159057

Influence of Oxygen and Mediators on Laccase-Catalyzed Polymerization of Lignosulfonate
Huber et al., 2016, ACS Sustainable Chemistry & Engineering,
https://doi.org/10.1021/acssuschemeng.6b00692

J

Photosynthetic physiology and biomass partitioning in the model diatom Phaeodactylum tricornutum grown in a sinusoidal light regime
Jallet et al., 2016, Algal Research
https://doi.org/10.1016/j.algal.2016.05.014

Evidence for water-mediated mechanisms in coral–algal interactions
Jorissen et al., 2016, Proceedings of the Royal Society B
http://doi.org/10.1098/rspb.2016.1137

K

Male sexually coercive behaviour drives increased swimming efficiency in female guppies
Killen et al., 2016, Functional Ecology
https://doi.org/10.1111/1365-2435.12527

Fabrication of multilayered vascular tissues using microfluidic agarose hydrogel platforms
Kinoshita et al., 2016, Biotechnology Journal
https://doi.org/10.1002/biot.201600083

Easy-to-use strategy for reference gene selection in quantitative real-time PCR experiments
Klenke et al. 2016, Naunyn-Schmiedeberg's Archives of Pharmacology
https://doi.org/10.1007/s00210-016-1305-8

In-vivo imaging of O2 dynamics on coral surfaces spray-painted with sensor nanoparticles
Koren et al. 2016, Sensors and Actuators B: Chemical
https://doi.org/10.1016/j.snb.2016.05.147                

Development of a rechargeable optical hydrogen peroxide sensor – sensor design and biological application
Koren et al. 2016, Analyst
https://doi.org/ 10.1039/C6AN00864J

New encounters in Arctic waters: a comparison of metabolism and performance of polar cod (Boreogadus saida) and Atlantic cod (Gadus morhua) under ocean acidification and warming
Kunz et al., 2016, Polar Biology
https://doi.org/10.1007/s00300-016-1932-z

L

Quasi-continuous parallel online scattered light, fluorescence and dissolved oxygen tension measurement combined with monitoring of the oxygen transfer rate in each well of a shaken microtiter plate
Ladner et al., 2016, Microbial Cell Factories
https://doi.org/10.1186/s12934-016-0608-2

Biofilm history and oxygen availability interact to affect habitat selection in a marine invertebrate
Lagos et al., 2016, Biofouling
http://dx.doi.org/10.1080/08927014.2016.1178725

In situ quantification of ultra-low O2 concentrations in oxygen minimum zones: Application of novel optodes
Larsen et al., Limnology and Oceanography: Methods
https://doi.org/10.1002/lom3.10126

Behaviour in a standardized assay, but not metabolic or growth rate, predicts behavioural variation in an adult aquatic top predator Esox lucius in the wild
Laskowski et al., 2016, Journal of Fish Biology
https://doi.org/10.1111/jfb.12933

Intermittent Hypoxia and Prolonged Suboxia Measured In situ in a Marine Sponge
Lavy et al., 2016, Frontiers in Marine Science
https://doi.org/10.3389/fmars.2016.00263

Vegetation successfully prevents oxidization of sulfide minerals in mine tailings
Li et al., 2016, Journal of Environmental Management
https://doi.org/10.1016/j.jenvman.2016.04.026

Photosynthetic Acclimation of Symbiodinium in hospite Depends on Vertical Position in the Tissue of the Scleractinian Coral Montastrea curta
Lichtenberg et al. 2016, Frontiers in Microbiology
https://doi.org/10.3389/fmicb.2016.00230

Heat generation and light scattering of green fluorescent protein-like pigments in coral tissue
Lyndby et al. 2016, Scientific Reports
https://doi.org/10.1038/srep26599

M

Limited Capacity for Faster Digestion in Larval Coral Reef Fish at an Elevated Temperature
McLeod and Clark, 2016, PLOS One
http://dx.doi.org/10.1371/journal.pone.0155360

Effects of High Dissolved Inorganic and Organic Carbon Availability on the Physiology of the Hard Coral Acropora millepora from the Great Barrier Reef
Meyer et al. 2016, PLOS ONE
https://doi.org/10.1371/journal.pone.0149598

Peeking under the Iron Curtain: Development of a Microcosm for Imaging the Colonization of Steel Surfaces by Mariprofundus sp. Strain DIS-1, an Oxygen-Tolerant Fe-Oxidizing Bacterium
Mumford et al., 2016, Applied and Environmental Microbiology
https://doi.org/10.1128/AEM.01990-16

N

Effect of elevated carbon dioxide on shoal familiarity and metabolism in a coral reef fish
Nadler et al., 2016, Conservation Physiology
https://doi.org/10.1093/conphys/cow052

Biocatalytic Properties and Structural Analysis of Eugenol Oxidase from Rhodococcus jostii RHA1: A Versatile Oxidative Biocatalyst
Nguyen et al., 2016, ChemBioChem
https://doi.org/10.1002/cbic.201600148

P

Top predators negate the effect of mesopredators on prey physiology
Palacios et al., 2016, Journal of Animal Ecology
https://doi.org/10.1111/1365-2656.12523

Fluorinated methacrylamide chitosan hydrogels enhance collagen synthesis in wound healing through increased oxygen availability
Patil et al., 2016, Acta Biomaterialia
https://doi.org/10.1016/j.actbio.2016.03.022

Characterization of the monolignol oxidoreductase AtBBE-like protein 15 L182V for biocatalytic applications
Pils et al., 2016, Journal of Molecular Catalysis B: Enzymatic
http://dx.doi.org/10.1016/j.molcatb.2016.10.018

Body length rather than routine metabolic rate and body condition correlates with activity and risk-taking in juvenile zebrafish Danio rerio
Polverino et al., 2016, Journal of Fish Biology
https://doi.org/10.1111/jfb.13100

R

Scavenging dissolved oxygen via acoustic droplet vaporization
Radhakrishnan et al., 2016, Ultrasonics Sonochemistry
http://dx.doi.org/10.1016/j.ultsonch.2016.01.019

Salinity stress from the perspective of the energy-redox axis: Lessons from a marine intertidal flatworm
Rivera-Ingraham et al., 2016, Redox Biology
http://doi.org/10.1016/j.redox.2016.09.012

Experimental methods in aquatic respirometry: the importance of mixing devices and accounting for background respiration
Rodgers et al., 2016, Journal of Fish Biology
https://doi.org/10.1111/jfb.12848

Methods matter: considering locomotory mode and respirometry technique when estimating metabolic rates of fishes
Rummer et al., 2016, Conservation Physiology
https://doi.org/10.1093/conphys/cow008

S

Physiological constraints to climate warming in fish follow principles of plastic floors and concrete ceilings
Sandblom et al., 2016, Nature Communications
http://doi.org/10.1038/ncomms11447

Corrosion inhibition synergies on a model Al-Cu-Mg sample studied by localized scanning electrochemical techniques
Snihirova et al. 2016, Corrosion Science
https://doi.org/10.1016/j.corsci.2016.08.008

Effect of closed v. intermittent-flow respirometry on hypoxia tolerance in the shiner perch Cymatogaster aggregate
Snyder et al., 2016, Journal of Fish Biology
http://doi.org/10.1111/jfb.12837

Light Regimes Shape Utilization of Extracellular Organic C and N in a Cyanobacterial Biofilm
Stuart et al., 2016, mBio
http://doi.org/10.1128/mBio.00650-16

Sources of variation in oxygen consumption of aquatic animals demonstrated by simulated constant oxygen consumption and respirometers of different sizes
Svendsen et al., 2016, Journal of Fish Biology
http://doi.org/10.1111/jfb.12851

T

Low temperature trumps high food availability to determine the distribution of intertidal mussels Perna perna in South Africa
Tagliarolo et al., 2016, Marine Ecology Progress Series
https://doi.org/10.3354/meps11876

Physiological Regulation of Valve-Opening Degree Enables Mussels Mytilus edulis to Overcome Starvation Periods by Reducing the Oxygen Uptake
Tang and Riisgård, 2016, Open Journal of Marine Science
http://dx.doi.org/10.4236/ojms.2016.63029

V

Differences in diet-induced flexibility in morphology and growth in a partially migratory species
Van Leeuwen et al., 2016, Canadian Journal of Fisheries and Aquatic Sciences
https://doi.org/10.1139/cjfas-2015-0300